{
  "id": "lib-skill:bioinformatics--snakemake-workflow-manager",
  "_kind": "LibrarySkill",
  "_file": "generated-library/skills.yaml",
  "_cluster": "generated-library",
  "attributes": {
    "displayName": "snakemake-workflow-manager",
    "description": "Snakemake workflow management skill for rule-based pipeline execution",
    "libraryPath": "library/specializations/domains/science/bioinformatics/skills/snakemake-workflow-manager/SKILL.md",
    "specialization": "bioinformatics",
    "contentSummary": "# Snakemake Workflow Manager Skill\n\n## Purpose\nEnable Snakemake workflow management for rule-based pipeline execution.\n\n## Capabilities\n- DAG-based workflow execution\n- Cluster/cloud execution\n- Conda environment management\n- Checkpointing and resume\n- Benchmark collection\n- Report genera"
  },
  "outgoingEdges": [
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      "kind": "lib_requires_skill_area",
      "attributes": {
        "weight": 1
      }
    },
    {
      "from": "lib-skill:bioinformatics--snakemake-workflow-manager",
      "to": "skill-area:data-analysis",
      "kind": "lib_requires_skill_area",
      "attributes": {
        "weight": 0.7
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    },
    {
      "from": "lib-skill:bioinformatics--snakemake-workflow-manager",
      "to": "skill-area:containerization",
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      "attributes": {
        "weight": 0.5
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    },
    {
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      "kind": "lib_applies_to_domain",
      "attributes": {
        "weight": 1
      }
    },
    {
      "from": "lib-skill:bioinformatics--snakemake-workflow-manager",
      "to": "role:research-engineer",
      "kind": "lib_involves_role",
      "attributes": {
        "weight": 1
      }
    },
    {
      "from": "lib-skill:bioinformatics--snakemake-workflow-manager",
      "to": "role:biomedical-engineer",
      "kind": "lib_involves_role",
      "attributes": {
        "weight": 0.7
      }
    },
    {
      "from": "lib-skill:bioinformatics--snakemake-workflow-manager",
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      "kind": "lib_implements_workflow",
      "attributes": {
        "weight": 1
      }
    },
    {
      "from": "lib-skill:bioinformatics--snakemake-workflow-manager",
      "to": "specialization:biomedical-informatics",
      "kind": "lib_belongs_to_specialization",
      "attributes": {
        "weight": 1
      }
    },
    {
      "from": "lib-skill:bioinformatics--snakemake-workflow-manager",
      "to": "specialization:bioinformatics",
      "kind": "lib_belongs_to_specialization",
      "attributes": {
        "weight": 0.9
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    }
  ],
  "incomingEdges": []
}