II.
LibrarySkill overview
Reference · livelib-skill:bioinformatics--snakemake-workflow-manager
snakemake-workflow-manager overview
Snakemake workflow management skill for rule-based pipeline execution
Attributes
displayName
snakemake-workflow-manager
description
Snakemake workflow management skill for rule-based pipeline execution
libraryPath
library/specializations/domains/science/bioinformatics/skills/snakemake-workflow-manager/SKILL.md
specialization
bioinformatics
contentSummary
# Snakemake Workflow Manager Skill
## Purpose
Enable Snakemake workflow management for rule-based pipeline execution.
## Capabilities
- DAG-based workflow execution
- Cluster/cloud execution
- Conda environment management
- Checkpointing and resume
- Benchmark collection
- Report genera
Outgoing edges
lib_applies_to_domain1
- domain:bioinformatics·DomainBioinformatics
lib_belongs_to_specialization2
- specialization:biomedical-informatics·SpecializationBiomedical Informatics
- specialization:bioinformatics·SpecializationBioinformatics
lib_implements_workflow1
- workflow:experiment-design·WorkflowExperiment Design
lib_involves_role2
- role:research-engineer·RoleResearch Engineer
- role:biomedical-engineer·RoleBiomedical Engineer
lib_requires_skill_area3
- skill-area:python-data-pipelines·SkillAreaPython Data Pipelines
- skill-area:data-analysis·SkillAreaData Analysis
- skill-area:containerization·SkillArea
Incoming edges
None.