II.
LibraryProcess overview
Reference · livelib-process:bioinformatics--multi-omics-integration
multi-omics-integration overview
Multi-Omics Data Integration - Integrative analysis combining genomics, transcriptomics, proteomics, and metabolomics data to provide comprehensive biological insights and systems-level understanding.
Attributes
displayName
multi-omics-integration
description
Multi-Omics Data Integration - Integrative analysis combining genomics, transcriptomics,
proteomics, and metabolomics data to provide comprehensive biological insights and systems-level understanding.
libraryPath
library/specializations/domains/science/bioinformatics/multi-omics-integration.js
specialization
bioinformatics
references
- - MOFA+: https://biofam.github.io/MOFA2/ - mixOmics: http://mixomics.org/ - iCluster: https://www.mskcc.org/departments/epidemiology-biostatistics/biostatistics/icluster - PathwayCommons: https://www.pathwaycommons.org/
example
const result = await orchestrate('specializations/domains/science/bioinformatics/multi-omics-integration', {
projectName: 'Cancer Multi-Omics Study',
omicsData: {
genomics: '/data/mutations.vcf',
transcriptomics: '/data/expression.tsv',
proteomics: '/data/proteins.tsv',
metabolomics: '/data/metabolites.tsv'
},
sampleMetadata: { conditions: ['tumor', 'normal'] }
});
usesAgents
- general-purpose
Outgoing edges
lib_applies_to_domain1
- domain:bioinformatics·DomainBioinformatics
lib_belongs_to_specialization2
- specialization:biomedical-informatics·SpecializationBiomedical Informatics
- specialization:bioinformatics·SpecializationBioinformatics
lib_implements_workflow1
- workflow:experiment-design·WorkflowExperiment Design
lib_involves_role2
- role:research-engineer·RoleResearch Engineer
- role:biomedical-engineer·RoleBiomedical Engineer
lib_requires_skill_area3
- skill-area:data-analysis·SkillAreaData Analysis
- skill-area:statistical-analysis·SkillAreaStatistical Analysis
- skill-area:python-data-pipelines·SkillAreaPython Data Pipelines
Incoming edges
None.