II.
LibrarySkill overview
Reference · livelib-skill:bioinformatics--vep-variant-annotator
vep-variant-annotator overview
Variant Effect Predictor skill for comprehensive variant annotation with clinical database integration
Attributes
displayName
vep-variant-annotator
description
Variant Effect Predictor skill for comprehensive variant annotation with clinical database integration
libraryPath
library/specializations/domains/science/bioinformatics/skills/vep-variant-annotator/SKILL.md
specialization
bioinformatics
contentSummary
# VEP Variant Annotator Skill
## Purpose
Provide comprehensive variant annotation using Variant Effect Predictor with clinical database integration.
## Capabilities
- Functional consequence prediction
- Population frequency annotation (gnomAD)
- Clinical database integration (ClinVar, COSM
Outgoing edges
lib_applies_to_domain1
- domain:bioinformatics·DomainBioinformatics
lib_belongs_to_specialization2
- specialization:biomedical-informatics·SpecializationBiomedical Informatics
- specialization:bioinformatics·SpecializationBioinformatics
lib_implements_workflow1
- workflow:experiment-design·WorkflowExperiment Design
lib_involves_role2
- role:research-engineer·RoleResearch Engineer
- role:biomedical-engineer·RoleBiomedical Engineer
lib_requires_skill_area3
- skill-area:statistical-analysis·SkillAreaStatistical Analysis
- skill-area:data-analysis·SkillAreaData Analysis
- skill-area:python-data-pipelines·SkillAreaPython Data Pipelines
Incoming edges
None.