II.
LibrarySkill overview
Reference · livelib-skill:bioinformatics--seurat-single-cell-analyzer
seurat-single-cell-analyzer overview
Seurat single-cell analysis skill for clustering, annotation, and trajectory analysis
Attributes
displayName
seurat-single-cell-analyzer
description
Seurat single-cell analysis skill for clustering, annotation, and trajectory analysis
libraryPath
library/specializations/domains/science/bioinformatics/skills/seurat-single-cell-analyzer/SKILL.md
specialization
bioinformatics
contentSummary
# Seurat Single-Cell Analyzer Skill
## Purpose
Enable Seurat single-cell analysis for clustering, annotation, and trajectory analysis of scRNA-seq data.
## Capabilities
- Quality filtering and normalization
- Dimensionality reduction (PCA, UMAP)
- Graph-based clustering
- Marker gene iden
Outgoing edges
lib_applies_to_domain1
- domain:bioinformatics·DomainBioinformatics
lib_belongs_to_specialization2
- specialization:biomedical-informatics·SpecializationBiomedical Informatics
- specialization:bioinformatics·SpecializationBioinformatics
lib_implements_workflow1
- workflow:experiment-design·WorkflowExperiment Design
lib_involves_role2
- role:research-scientist·RoleResearch Scientist
- role:biomedical-engineer·RoleBiomedical Engineer
lib_requires_skill_area3
- skill-area:statistical-analysis·SkillAreaStatistical Analysis
- skill-area:machine-learning-frameworks·SkillAreaMachine Learning Frameworks
- skill-area:data-analysis·SkillAreaData Analysis
Incoming edges
None.