II.
LibrarySkill overview
Reference · livelib-skill:bioinformatics--pharmgkb-annotator
pharmgkb-annotator overview
PharmGKB pharmacogenomics annotation skill for drug-gene interaction assessment
Attributes
displayName
pharmgkb-annotator
description
PharmGKB pharmacogenomics annotation skill for drug-gene interaction assessment
libraryPath
library/specializations/domains/science/bioinformatics/skills/pharmgkb-annotator/SKILL.md
specialization
bioinformatics
contentSummary
# PharmGKB Annotator Skill
## Purpose
Provide PharmGKB pharmacogenomics annotation for drug-gene interaction assessment.
## Capabilities
- Star allele calling (Stargazer)
- Diplotype determination
- CPIC guideline integration
- Drug recommendation generation
- Clinical annotation lookup
Outgoing edges
lib_applies_to_domain1
- domain:bioinformatics·DomainBioinformatics
lib_belongs_to_specialization2
- specialization:biomedical-informatics·SpecializationBiomedical Informatics
- specialization:bioinformatics·SpecializationBioinformatics
lib_implements_workflow1
- workflow:experiment-design·WorkflowExperiment Design
lib_involves_role2
- role:biomedical-engineer·RoleBiomedical Engineer
- role:research-scientist·RoleResearch Scientist
lib_requires_skill_area3
- skill-area:data-analysis·SkillAreaData Analysis
- skill-area:statistical-analysis·SkillAreaStatistical Analysis
- skill-area:python-data-pipelines·SkillAreaPython Data Pipelines
Incoming edges
None.