II.
LibrarySkill overview
Reference · livelib-skill:bioinformatics--deseq2-differential-expression
deseq2-differential-expression overview
DESeq2 differential expression analysis skill with normalization, statistical modeling, and visualization
Attributes
displayName
deseq2-differential-expression
description
DESeq2 differential expression analysis skill with normalization, statistical modeling, and visualization
libraryPath
library/specializations/domains/science/bioinformatics/skills/deseq2-differential-expression/SKILL.md
specialization
bioinformatics
contentSummary
# DESeq2 Differential Expression Skill
## Purpose
Provide DESeq2 differential expression analysis with normalization, statistical modeling, and visualization.
## Capabilities
- Size factor normalization
- Negative binomial modeling
- Shrinkage estimation
- Batch effect modeling
- Multi-f
Outgoing edges
lib_applies_to_domain1
- domain:bioinformatics·DomainBioinformatics
lib_belongs_to_specialization2
- specialization:biomedical-informatics·SpecializationBiomedical Informatics
- specialization:bioinformatics·SpecializationBioinformatics
lib_implements_workflow1
- workflow:experiment-design·WorkflowExperiment Design
lib_involves_role2
- role:research-scientist·RoleResearch Scientist
- role:biomedical-engineer·RoleBiomedical Engineer
lib_requires_skill_area3
- skill-area:statistical-analysis·SkillAreaStatistical Analysis
- skill-area:python-data-pipelines·SkillAreaPython Data Pipelines
- skill-area:data-analysis·SkillAreaData Analysis
Incoming edges
None.