II.
LibrarySkill overview
Reference · livelib-skill:bioinformatics--cellranger-processor
cellranger-processor overview
Cell Ranger skill for 10X Genomics single-cell data processing
Attributes
displayName
cellranger-processor
description
Cell Ranger skill for 10X Genomics single-cell data processing
libraryPath
library/specializations/domains/science/bioinformatics/skills/cellranger-processor/SKILL.md
specialization
bioinformatics
contentSummary
# CellRanger Processor Skill
## Purpose
Provide Cell Ranger capabilities for 10X Genomics single-cell data processing including demultiplexing and alignment.
## Capabilities
- BCL to FASTQ conversion
- Cell barcode demultiplexing
- UMI counting
- Feature barcode processing
- Aggregate sa
Outgoing edges
lib_applies_to_domain1
- domain:bioinformatics·DomainBioinformatics
lib_belongs_to_specialization2
- specialization:biomedical-informatics·SpecializationBiomedical Informatics
- specialization:bioinformatics·SpecializationBioinformatics
lib_implements_workflow1
- workflow:experiment-design·WorkflowExperiment Design
lib_involves_role2
- role:research-engineer·RoleResearch Engineer
- role:biomedical-engineer·RoleBiomedical Engineer
lib_requires_skill_area3
- skill-area:python-data-pipelines·SkillAreaPython Data Pipelines
- skill-area:data-analysis·SkillAreaData Analysis
- skill-area:statistical-analysis·SkillAreaStatistical Analysis
Incoming edges
None.