II.
LibraryProcess overview
Reference · livelib-process:bioinformatics--pharmacogenomics-analysis
pharmacogenomics-analysis overview
Pharmacogenomics Analysis - Analysis of genetic variants affecting drug metabolism, efficacy, and adverse reactions. Supports precision medicine by identifying patient-specific pharmacogenomic markers.
Attributes
displayName
pharmacogenomics-analysis
description
Pharmacogenomics Analysis - Analysis of genetic variants affecting drug metabolism,
efficacy, and adverse reactions. Supports precision medicine by identifying patient-specific
pharmacogenomic markers.
libraryPath
library/specializations/domains/science/bioinformatics/pharmacogenomics-analysis.js
specialization
bioinformatics
references
- - PharmGKB: https://www.pharmgkb.org/ - CPIC Guidelines: https://cpicpgx.org/guidelines/ - PharmVar: https://www.pharmvar.org/ - DPWG Guidelines: https://www.knmp.nl/dossiers/farmacogenetica
example
const result = await orchestrate('specializations/domains/science/bioinformatics/pharmacogenomics-analysis', {
projectName: 'Patient PGx Profile',
sampleId: 'PATIENT001',
vcfFile: '/data/patient.vcf',
drugList: ['warfarin', 'clopidogrel', 'codeine', 'tamoxifen']
});
usesAgents
- general-purpose
Outgoing edges
lib_applies_to_domain1
- domain:bioinformatics·DomainBioinformatics
lib_belongs_to_specialization2
- specialization:biomedical-informatics·SpecializationBiomedical Informatics
- specialization:bioinformatics·SpecializationBioinformatics
lib_implements_workflow1
- workflow:experiment-design·WorkflowExperiment Design
lib_involves_role2
- role:research-engineer·RoleResearch Engineer
- role:biomedical-engineer·RoleBiomedical Engineer
lib_requires_skill_area3
- skill-area:data-analysis·SkillAreaData Analysis
- skill-area:statistical-analysis·SkillAreaStatistical Analysis
- skill-area:python-data-pipelines·SkillAreaPython Data Pipelines
Incoming edges
None.